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Address.
Education.
Academic
and
Research Experience.
Technical Experience.
Publication |
Publications:
- L. Cruz, B. Urbanc, D. L. Roe, A. Inglis, H. E. Stanley, and D. L.
Rosene, ``Computer simulations of the effects of aging in the brain,''
in preparation (2008).
- B. Urbanc, L. Cruz, and G. Bitan,
``In silico study of amyloid beta-protein oligomer formation in the presence
of peptide inhibitors,'' in preparation (2008).
- L. Cruz, B. Urbanc, N. D. Lazo, D. B. Teplow, and H. E. Stanley,
``Comparative analysis of the Artic and Iowa mutations on the nucleation of the
Abeta-protein: an all-atom molecular
dynamics study,'' in preparation (2008).
- S. Yun, S. Peng, B. Urbanc, S. V. Buldyrev, L. Cruz, D. B.
Teplow, and H. E. Stanley, ``Discrete Molecular Dynamics Study of Abeta16-22
Folding and Aggregation,'' in preparation (2008).
- L. Cruz, D. L. Roe, B. Urbanc, A. Inglis, H. E. Stanley, and D. L.
Rosene, ``Age-related reduction in microcolumnar structure correlates with
cognitive decline in the ventral but not dorsal region part of area 46 of the
rhesus monkey,'' Neuroscience, 158, 1509-1520 (2009).
[PDF]
- S. H. Freeman, R. Kandel, L. Cruz, A. Rozkalne, K. Newell,
M. P. Frosch, E. T. Hedley-Whyte, J. J. Locascio, L. Lipsitz, B. T. Hyman,
``Preservation of Neuronal Number Despite Age-Related Cortical Brain Atrophy in
Elderly Subjects Without Alzheimer Disease,'' Journal of Neuropathology and
Experimental Neurology, 67, 1205-1212 (2008).
- E. A. Fradinger, B. H. Monien, B. Urbanc, A. Lomakin, M. Tan, H.
Li, S. M. Spring, M. M. Condron, L. Cruz, C.-W. Xie, G. B. Benedek, and
G. Bitan, ``C-terminal peptides coassemble into A$\beta$42 oligomers and
protect neurons against Abeta42-induced neurotoxicity,''
Proc. Natl. Acad. Sci., 105, 14175-14180 (2008).
- A. Inglis, L. Cruz, D. L. Roe, H. E. Stanley, D. L. Rosene,
and B. Urbanc, ``Automated indentification of neurons and their locations,''
Journal of Microscopy, 230(3), 339-347 (2007).
- L. Cruz, B. Urbanc, A. Inglis, D. L. Rosene, and H. E. Stanley,
``Generating a model of the Three-dimensional Spatial Distribution of Neurons using Density Maps,''
NeuroImage 40 (3), 1105-1115 (2008).
[PDF]
- S. Yun, B. Urbanc, L. Cruz, G. Bitan, D. B. Teplow, and H. E. Stanley,
``Role of electrostatic interactions in amyloid beta-protein oligomer formation: A discrete molecular
dynamics study,'' Biophys Journal 92, 4064-4077 (2007).
[PDF]
- B. Urbanc, L. Cruz, D. B. Teplow, and H. E. Stanley,
``Computer simulations of Alzheimer's amyloid beta-protein folding and assembly,'' invited
review paper, Current Alzheimer Research, 3, 493-504 (2006).
[PDF]
- D. B. Teplow, N. D. Lazo, G. Bitan, S. Bernstein, T. Wyttenbach, M. T. Bowers,
A. Baumketner, J.-E. Shea, B. Urbanc, L. Cruz, J. Borreguero, H. E. Stanley, ``Elucidating
Amyloid beta-Protein Folding and Assembly: A Multidisciplinary Approach,''
Accounts of Chemical Research, 39, 635-645 (2006).
[PDF]
- B. Urbanc, J. M. Borreguero, L. Cruz, and H. E. Stanley, ``Ab initio
Discrete Molecular Dynamics Approach to Protein Folding and Aggregation,''
Methods in Enzymology, 412, p. 314-338 (2006).
[PDF]
- L. Cruz, B. Urbanc, J. M. Borreguero, N. D. Lazo, D. B. Teplow, and H. E.
Stanley, ``Solvent and Mutation Effects on the Nucleation of Amyloid
$\beta$-protein Folding,''
Proc. Natl. Acad. Sci., 102, p. 18258-18263 (2005).
[PDF]
- L. Cruz, S. V. Buldyrev, S. Peng, D.
L. Roe, B. Urbanc, H. E. Stanley, and D. L. Rosene, ``A Statistically
Based Density Map
Method for Identification and Quantification of Regional Differences in
Microcolumnarity in the Monkey Brain,'' J. Neuroscience Methods,
141/2, p. 321-332 (2005).
[PDF]
- B. Urbanc, L. Cruz, S. Yun, S. V.
Buldyrev, G. Bitan, D. B. Teplow, and H. E.
Stanley, ``In silico study of amyloid beta-protein folding and
oligomerization,'' Proc. Natl. Acad. Sci., 101, p. 17345-17350 (2004).
[PDF]
- L. Cruz, D. L. Roe, B. Urbanc, H.
Cabral, H. E. Stanley,
and D. L. Rosene, ``Age-related reduction in microcolumnar structure in
area
46 of the rhesus monkey correlates with behavioral decline,'' Proc.
Natl. Acad. Sci., 101, p. 15846-15851 (2004).
[PDF]
- B. Urbanc, L. Cruz, F. Ding, D.
Sammond, S. Khare,S. V. Buldyrev, H. E.
Stanley, and N. V. Dokholyan, ``Molecular Dynamics Simulation of
Amyloid beta
Dimer Formation,'' Biophys. J., 87, p. 2310-2321 (2004).
[PDF]
- S. Peng, F. Ding, B. Urbanc, S. V.
Buldyrev, L. Cruz, H. E. Stanley, and N. V.
Dokholyan, ``Discrete molecular dynamics simulations of peptide
aggregation,''
Phys. Rev. E, 69, 041908, (2004).
[PDF]
- S. Peng, B. Urbanc, L. Cruz, B. T.
Hyman, and
H. E. Stanley, ``Neuron Recognition by Parallel Potts
Segmentation,'' Proc. Natl. Acad. Sci.,
100, p. 3847-3852 (2003).
[PDF]
- B. Urbanc, L. Cruz, R. Le, J.
Sanders, K. Hsiao-Ashe, K. Duff,
H. E. Stanley, M. C. Irrizarry and B. T. Hyman,
"Neurotoxic Effects of Thioflavin S Positive Amyloid
Deposits in Transgenic Mice and Alzheimer's Disease,"
Proc. Natl. Acad. Sci., 99, p. 13990-13995 (2002).
[PDF]
- R. Le, L. Cruz, B. Urbanc, R. B.
Knowles, K. Hsiao-Ashe, K. Duff,
M. C. Irizarry, H. E. Stanley and B. T. Hyman,
"Plaque-Induced Abnormalities in Neurite Geometry in Transgenic
Models of Alzheimer Disease: Implications for Neural System
Disruption,"
J. Neuropath. Exp. Neuro., 60, p. 753-758 (2001).
- Contributor to the "Dictionary of
Pure and Applied Physics," a volume in
the Comprehensive Dictionary
of Physics, ed. B. Basu, CRC
Press,
Florida, USA (2001).
- S. V. Buldyrev, L. Cruz, T.
Gomez-Isla, E. Gomez-Tortoza, S. Havlin, R. Le, H. E. Stanley, B.
Urbanc and B. T. Hyman, "Disruption of Neuronal Microcolumnar
Architecture in Alzheimer and Lewy Body Dementias," Proc. Natl. Acad.
Sci. 97, p. 5039-5043 (2000).
[PDF]
- B. Urbanc, L. Cruz, S. V. Buldyrev,
S. Havlin, B. T. Hyman, and H. E. Stanley, "Dynamic Feedback in an
Aggregation- Disaggregation Model," Phys. Rev. E 60, 2120-2126 (1999).
[PDF]
- B. Urbanc, L. Cruz, S. V. Buldyrev,
S. Havlin, M. C. Irizarry, H. E. Stanley, and B. T. Hyman, "Dynamics of
Plaque Formation in Alzheimer Disease," Biophys. J. 76, 1330-1334
(1999).
[PDF]
- R. B. Knowles, C. Wyart, S. V.
Buldyrev, L. Cruz, B. Urbanc, M. E. Hasselmo, H. E. Stanley, and B. T.
Hyman, "Plaque-Induced Neural Network Disruption in Alzheimer's
Disease," Proc. Natl. Acad. Sci. 96, 5274-5279 (1999).
[PDF]
- B. T. Hyman, R. B. Knowles, C.
Wyart, S.V. Buldyrev, L. Cruz, B. Urbanc, M. E. Hasselmo, and H. E.
Stanley, "Plaque-induced neurite abnormalities: Implications for
disruption of neural networks in Alzheimer's disease," J. Neuropath.
Exp. Neurol. 58, 557-557 (1999).
- H. E. Stanley, S. V. Buldyrev, L.
Cruz, T. Gomez-Isla, S. Havlin, B. T. Hyman, R. Knowles, B. Urbanc and
C. Wyart, "Statistical Physics and Alzheimer's Disease," [Proc.
Bar-Ilan Conf], Physica A 249, 460-471 (1998).
[PDF]
- L. Cruz, B. Urbanc, S. V. Buldyrev,
R. Christie, T. Gomez-Isla, S. Havlin, M. McNamara, H. E. Stanley, B.
T. Hyman, "Aggregation and disaggregation of Senile Plaques in
Alzheimer Disease," Proc. Natl. Acad. Sci. 94, 7612-7616 (1997).
[PDF]
- R. B. Knowles, L. Cruz, B.
Kutnjak-Urbanc, R. H. Christie, H. E. Stanley HE, and B. T. Hyman, "The
effect of senile plaques and neuropil threads on neurite morphology in
Alzheimer's disease," Neurology 48, 3045-3045 Suppl. 2, (1997).
- B. Urbanc and L. Cruz, "Order
Parameter and Segregated Phases in a Sandpile Model with Two Particle
Sizes," Phys. Rev. E 56, 1571-1579 (1997).
[PDF]
- H. E. Stanley, L. Cruz, S. T.
Harrington, P. H. Poole, S. Sastry, F. Sciortino, F. W. Starr, and R.
Zhang, "Cooperative Molecular Motions in Water: The Liquid-Liquid
Critical Point Hypothesis," [Proc. International Conf. on "Complex
Fluids"] Physica A 236, 19-37 (1997).
[PDF]
- L. Cruz, P .Phillips, A.
Castro-Neto, "Kondo Resonance and log-T Conductivity in Highly
Conducting trans-Polyacetylene," Europhysics Letters 29, 389-394 (1995).
- L. Cruz, P. Phillips, "Phase Diagram
for Strongly-Correlated Doped trans Polyacetylene," Physical Review B
49, 5149-5156 (1994).
[PDF]
- P. Phillips, L. Cruz, "Metallic
Polyacetylene is a Soliton Lattice," Synth. Met. 65, 225-232 (1994).
- L. Fonseca, M. Gomez, L. Cruz, "Calculation
of the Aggregation and Electrodynamic Effects in Granular Systems,"
Physica A 207, 123-130 (1994).
- Q. Li, L. Cruz, P. Phillips,
"Granular-rod Model for Electronic Conduction in Polyaniline," Physical
Review B 47 , 1840-1845 (1993).
[PDF]
- Q. Li, L. Cruz, P. Phillips, "Dimers
and Rods in the Conducting States of Polyaniline," Synth. Met. 55-57,
4697-4703 (1993).
- W. Vargas, L. Cruz, L. Fonseca, M.
Gomez, "T-Matrix Approach for Calculating Local Fields around Clusters
of Rotated Spheroids," App. Opt. 32, 2164-2170 (1993).
[PDF]
- L. Fonseca, L. Cruz, M. Gomez, J. A.
Gonzalo, "Determination of sizes of Potassium Colloids in KCl:O using
Light Scattering Techniques," App. Phys. Comm. 12, 153 (1993).
- L. Fonseca, L. Cruz, W. Vargas, M.
Gomez, "Theoretical Calculation of the Optical Absorption of Fractal
Colloidal Aggregates Using a Multiple Scattering Formalism," Condensed
Matter Theories 8, 561, ed. L.Blum, F.B.Malik, Plenum Press, N.Y.
(1993).
- M. Gomez, L. Fonseca, L. Cruz, W.
Vargas, "Calculation of Local Fields for Clusters of Ellipsoids within
the T-Matrix Approach," Mat. Res. Soc. Symp. Proceedings 195, 109
(1990).
- L. Cruz, L. Fonseca, M. Gomez,
"T-Matrix Approach for the Calculation of Local Fields in the
Neighborhood of Small Clusters in the Electrodynamic Regime," Physical
Review B 40, 7491-7500 (1989).
[PDF]
- M. Gomez, L. Fonseca, L. Cruz,
"Local Electric Field Enhancements in Composite Materials due to
Metallic Clusters," Proc. of the Intl. Workshop on: Electrodynamics of
Interfaces and Composite Systems 4, 447, ed. R.G.Barrera, W.L.Mochan,
World Scientific, N.J. (1987).
- M. Gomez, L. Fonseca, G. Rodriguez,
A. Velazquez, L. Cruz, "Multiple Scattering theories including
Correlation effects to obtain the Effective Dielectric Constant of
Non-Homogeneous Thin Films," Physical Review B 32, 3429-3441 (1985).
[PDF]
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